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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86609102
Protein type: Transmembrane
Type Confidence: 0.56
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRELWAVGK TVGLVDPSGL AFWLLGSLFL ALLLLGVSLG ESQPLSVFRG ILGSLSRRFP  60
   61 FQPPRGTPSP EARFRAALEA SLDAIYLLEA VRDPVTREIR DFVFVDVNAK GEELISLQRR 120
  121 QIIGQRLCEL LPINRWGGFF EKYKRVVETG IPLEEEFPIS GQPGLKASWI HHQVVPVGDG 180
  181 ILITSRDISE RVKMERALQE SESRYRALYE AIPDLIFELS AEGVILHCKP SPYVPTRHPP 240
  241 EFYVGCRAQD VFTGSLKEQY PSLAEGALVS QTPQYLEYEV EIEPGIRCYR RACVVAHGRD 300
  301 KVYILVRDIT ERKQAELALR EMEATQRAIL QAIPDLIVRL NRQGICLSFI SGGDVHLDCP 360
  361 AERHLGRSLQ EILPPALAEQ RLFYVQQALA TQTQQRYEYS IEVQGEVRYE EARIVPLNSQ 420
  421 EVLAIVRDIT EAKQAELALK AAEQVQRAIL EAIPDLIFRL DSQGICLSFV WGGEVVPYSS 480
  481 PDTYVGRSLQ ELLPPELAER RLFFVQQAIA TQTRQRYDQS IEIQGETRHE EVRIVPLNPQ 540
  541 EVVVIVRDVT DRVRSQQAVQ ESEQKFRALF ENAAVAILIR HAETGEILEA NSQAISAYGF 600
  601 SSLEELRAFD ASEQSPYRRA LRGGEFSLQS YLEQARQQGS ARFEWHWQRQ DGRVVWEDVF 660
  661 VQPLVLRGIP CWVFTAVDIT ARKSAEAELE QFFSVALDLL CIADAQGYFR RLNRAWETTL 720
  721 GYSLQELQSR PFLEWVHPED VPATQAAMQQ LIEEKRLDHF VNRYRTQDGS YRFIEWRASL 780
  781 AGSLFYAAGR DITVAKLAEE QMKAAKEAAE AASRAKSEFL ATISHEIRTP INAILGMTSL 840
  841 LLDTSLDPQQ QDWVQTIRYG GEVLLNLIND ILDFSKIESQ KLELEEIPFS LPQLVEELLD 900
  901 LMAAQAQSKD LELVAWVDPS LPPTLIGDPN RLRQILANLL SNAIKFTPQG EVVVTVEAGE 960
  961 RDPEKQWVNV QVRDTGIGIP PEKLDRLFKP FSQVDSSISR QFGGTGLGLA ISQRLCQLMG1020
 1021 GAIGVESQPG QGSTFRFRIP LKRPDQELLP TAAPDPCLAG KRVLLVEDNA SQRQLLSRLL1080
 1081 SAWGMEVTCC ALAAEAQAAA RTHSFDLALL DATLPGQDGL TLAANLRKAQ PRLLPLVLTG1140
 1141 RNFISTADPL PTLAKPVKAS QLRKLLLGLV GEKAPSSLSS SPAAPPSIWD ATLASRYPLQ1200
 1201 ILVAEDNPVN QKVIRLMLER LGYRPDIVGN GLEAVQALRL RPYDLVLMDM QMPELDGLAA1260
 1261 TRRIRAELPP ERQPRIVVLT ANVFSEGRAA AQAAGVDGYL TKPLEPAALV RVLQGSLPLP1320
 1321 IPASQEEDPP LDPVILAQMR AVFSSPEAWQ EMIQTYRQDS EALLGSLRQA LEQRDPQAIA1380
 1381 RLAHRLKGSS STLGAKRLAE LCQQLEKLVH AEPASSVKWD TIEQAVQKLE VAYRQVTLSL1440
 1441 SS

YRC Informatics Platform - Version 3.0
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