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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86608001
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKAPLPPNE EQRLAALRQY QILDTAPETA FDEIVRLAAH ICGTPIALVS LIDEHRQWFK  60
   61 AKFGVDVQET PRDVAFCAHA ILSPKEPLVV PDATQDPRFA DNPFVAQEPH IRFYAGIPLV 120
  121 TPEGQALGTL CVVDYQPRHL TPEQLEQLQA LAHQVVAQLE LRRTLRELAQ TPLLPKSGDT 180
  181 KPARKNRFLL KVTAGFGLAA LLLGGITYSA QRNASQLPQL TERVAHTLKV IQNLEGLLAE 240
  241 TRAAEAGKRG YLLTDNPRYL GEYQDSLEAI STRLRLLQEL TVDNPLQQER LKRLELLLEQ 300
  301 RLRVIQDLIR LREQEGLLAT QEALESSEGP RLVEQIADLI LVLQQEENRL LQQRSQEFQF 360
  361 AWVRTNLIAF GGLIFTYLVL ASVYFLIRRE TAEREEAERS LKQERDFTNA VIDTAGALVV 420
  421 VMDPEGRILR FNRAAEQLSG YSLAEVKNRL LWDLGLIPPE DVPGVKQAFE QLKGNHSLFL 480
  481 NRHENFWRTK QGALRLISWS NTALINAAGE VEFVMGTGID ITDRKLAELA LKESEERYRD 540
  541 LFENATDLIQ SVDAEGHFLY VNRAWKETLG YDEAQVYQMT LFDILHPDCR EHCQALFQKL 600
  601 LAGEKLERVE TAFLTATGET VWLEGNVSCR FEDGVMVATR GIFRNITEQK KAAEELERQN 660
  661 RRAQLLANLS LKIRESLDIA EILETAVTEI QALLKADRVL VYRFQPDGSG IISNEKTQPG 720
  721 IPSLLGEVIE DPCFQEKYAQ LYSQGRVRVV SDVESEGLEP CYLELLQKMQ VRANMVVPLF 780
  781 LEQQLWGLLL AHQCSGPRQW QPFEMELLSQ LANQIGIALT QAALLERERK RSLELEQARK 840
  841 AAEQAAQAKS SFLATMSHEI RTPMNAVLGM TGLLLETPLN AEQRDFVETI RISGDALLTL 900
  901 INDILDFSKL EAGEMELEIL DFDLRSCLEE VADLFAPTAH AKGLELAVLM PPEVPRYLRG 960
  961 DASRLRQILN NLVSNAIKFT HQGEVVIQAE VLQETATHAH LKLSVRDTGI GIPAAAQSKL1020
 1021 FQPFSQVDAS TTRKYGGTGL GLAICKQLTE LMGGTISLQS QEGQGSTFSV ELTLERQPYV1080
 1081 QQLSQPSARI PVDLQGKRLL AVDDNATNRK ILRCQATTWG MVVEEAENAY QAMDKLRQAV1140
 1141 REGRPFPLAV LDMQMPEVDG ETLGRWIKAD PQLAETQLVM MTSLGLGEHS RRAAEIGFAA1200
 1201 YLVKPVKQSR LQEALVMALG KSSGLSTSLL GMSPVLPQTT PREDRPRQSL RILLAEDNPV1260
 1261 NQKVALRQLE SLGYKADVVA NGQEVLDLLQ KVSYDLILMD CQMPVMDGYE ATRRLRQQER1320
 1321 RSGHRTVVIA ITANAMQEDR ERCLQAGMDD YLSKPVLKED LQRLLNHWSQ VIAQSAGGSS1380
 1381 NQAASEAASP ASPAESRDPS SPTQPYPIDS AYLDQVSGGD RGFQRELLQV FIQDCETQLP1440
 1441 QLRQAIAGYD AERMRRIAHR LKGASSNVGA NAFCQVVREL EHLGVALAQQ GSQGGHDLEW1500
 1501 ARALQAPEDL ERILADIRQY LQDLEE

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