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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86607438
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKAPLPPNE KERLAALRQY QILDTAPETA FDEIVRLAAY ICGTPIALVS LIDEHRQWFK  60
   61 AKFGVDVQET PRDVAFCAHA ILSPQEPLVV PDATQDPRFA DNPFVTQEPH IRFYAGIPLV 120
  121 TPEGQALGTL CVVDYQPRHL TPEQLEQLQA LAHQVVAQLE LRRTLRELAQ TPLLPKSGDT 180
  181 KPARKNRFLL KVTAGFGLAA LLLGGITYSA QRNASQLPQL TERVAHTLKV IQNLEGLLAE 240
  241 TGAAEAGQYG YLLTNNPRYL SEYQASLEAT STHLRLLKEL TADNPLQQER LKRLELLLEQ 300
  301 RLRVIQDLIR LREQEGLLAT QEALESSEGP RLMEQIVELI RVLQQEENRL LQQRSQEFQF 360
  361 AWVRTNLIAF GGLIFTYLVL ASVYFLIRRE TAEREEAERS LKQERDFTNA VIDTAGALVV 420
  421 VMDPEGRILR FNRAAEQLSG YSLAEVKGRL LWDLGLIPPE DVPGVKQAFE QLKGNHSLFL 480
  481 NRHENFWRTK QGALRLISWS NTALINAAGE VEFVMGTGID ITDRKLAELA LRESEERYRD 540
  541 LFENATDLIQ SVDAEGHFLY VNRAWKETLG YDEAQVYQMT LFDILHPDCR EHCQALFQKL 600
  601 LAGEKLERVE TAFLTASGET VWVEGNVNCR FEDGVMVATR GIFRNITEQK KAAEELERQN 660
  661 RRAQLLANLS LKIRESLDIA EILETAVTEI QALLKADRVL VYRFQPDGSG IISNEKTQPG 720
  721 IPSLAGEVIE DPCFQEKYAQ LYSQGRVRVV SDVESEGLEP CYLELLQKMQ VRANMVVPLF 780
  781 LEQQLWGLLL AHQCSGPRQW QPFEMELLSQ LANQIGIALT QAALLERERK RSLELEQARK 840
  841 AAEQAAQAKS SFLATMSHEI RTPMNAVLGM TGLLLETPLN AEQRDFVETI RVSGDALLTL 900
  901 INDILDFSKL EVGEMELEIL DFDLRSCLEE VADLFAPTAH AKGLELAVLV PPEVPRYLRG 960
  961 DASRLRQILN NLVSNAIKFT HQGEVVIQAE LMQETATHVQ LRLSVRDTGI GIPKDAQTKL1020
 1021 FQPFTQVDAS TTRKYGGTGL GLAICKQLTE LMGGRIFLES EEGRGSTFSL ELTLERQPYA1080
 1081 RQISQQPARI PVDLQGKRLL VVDDNATNRK IVRYQATAWG MVVEEAENAY QALDKLRQAA1140
 1141 REGIPFPLAV LDMQMPEVDG ETLGRWIKAD PELSQTQLVM MTSLGLGEHS RRAAEIGFAA1200
 1201 YLTKPVKQTR LQEALVMALG KSSGLATSLL GMGPPLSQSA PSASRPQQPL RILLAEDNPV1260
 1261 NQKVALRQLQ SLGYMADVVA NGQEVLDLLQ RVQYDLILMD CQMPVMDGYE ATRRLRQQER1320
 1321 GSGHRTVVIA ITANAMQEDR ERCLQAGMDD YLSKPVLKED LERVLNHWSQ RIAPSATGAA1380
 1381 NGPASPDPPS AEGANGNSAP TLPYPIDAAY LDRVTGGDRQ FQRELLQVFV QDCQNQLPHL1440
 1441 RQAVTKGDPE ELRKVAHRLK GASANVGAHA FSQAARELEH LGVGLAQPGS QADELAWASA1500
 1501 SQKLEELERI LADIRQYLQD LEA

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