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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86606314
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQASGSAGA SATAWHSLPL PAVIQKLQTD PDAGLTTQQV IQRQREYGPN ELISSPGRSA  60
   61 WQLFLDQFRN VMLLMLIAVA AISATLDLQE GEFPKDALAI LLIVGLNGLL GYLQESRAEK 120
  121 ALAALKKLAS PSVRVQRDGL WQEIPANQLV PGDRVLLEAG VQIPADGRLA EAVNLQVREA 180
  181 ALTGEAVPVS KQADCVLPED TELGERRNMA FMGTEVLQGR GILLVTATGM NTELGKVAAL 240
  241 LQTVENEPTP LQRRMSQLGN VLVSGSLALV ALVVIVGLLQ AGSMAPFTSL LEISLSMAVA 300
  301 VVPEGLPAVI TVTLAIGTQR MVRRNALIRR LPAVETLGSV TTICSDKTGT LTENKMVVTD 360
  361 ILTPERHYQV SGSGYIPKGS FYCRGQPIDP QSAPDLQALL RAVVFCNDAL LQASLPAQRG 420
  421 AAPTWSILGD PTEAALLVAA AKANLQKASL QEQHPRAQEI PFSSERKRMS VVVQEEGSYR 480
  481 VYVKGSPELV LEQCAQIQKG GTWQELSEAE RQAILAANNR LAAQGIRVLG VATQQLQRIP 540
  541 ENLEEIERNL VWLGLVGMYD PPRPEAREAV ARCRQAGIRT LMITGDHQLT AVAIARELGI 600
  601 LDSEGQAIDG RTLSRLSFEE LLQTVQRVNV YARVAPEHKL RIVQALQKQN QFVAMTGDGV 660
  661 NDAPALRQAD IGIAMGITGT DVSKEASDMV LLDDNFATIV AAIEEGRVVY SNIRRFVKYI 720
  721 LGSNIGEVLT VAAAPILGLE DVPLTPLQIL WMNLVTDGLP ALALAMEPAE PGVMQRPPFN 780
  781 PKESIFAQGL GAYMVRIGVV FAISTILMMA IVEAYIPHWR TMVFTTLCIA QMGHALAARS 840
  841 NDKLTLEMNP FSNPYLLGAV LATLLLQLAL LYVPFLRNFF GTEELTLPEL LICLGFSTVV 900
  901 MVWVDLEKLY RRWRQGSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle