YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ZFPL1_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLCKCPKRK VTNLFCFEHR VNVCEHCLVA NHAKCIVQSY LQWLQDSDYN PNCRLCNIPL  60
   61 AARETTRLIC YDLFHWACLN ERAAQLPRNT APAGYQCPSC SGPIFPPTNL AGPVASALRE 120
  121 KLATVNWARA GLGLPLIDEL VSPEPEPLNT SEFSDWSSFN ASGSPEQEET ASASAAPAFY 180
  181 SQVPRPPASP SRPEQHTVIH MGNPEPLTHA SAPRKVYDTR DDERAPGLHR DCDDDKYRRR 240
  241 PALGWLAQLL RSRAGSRKRP LTLLQRAGLL LLLGLLGFLA LLALMSRLGR AAADSDPNLD 300
  301 PLMNPHIRVG PS

Type	Start	End	Confidence
Cytoplasmic	1	262	0.57
Transmembrane Helix	263	285	0.87
Non-Cytoplasmic	286	312	0.55