YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NSE2_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGRSTSSSS SGSTGFISFS GVESALSSLK TFQSCISSGM DTASSVALDL VETQTEVSSE  60
   61 YSMDKAMVEF AMMDRELNHY LKAVQSTINH VKEERSEKIP DLKLLVEKKF LALQNKNSDA 120
  121 DFQNNEKFVQ FKQQLKELKK QYGLQSDREA DITEGVDEDM IVTQSQTNFI CPITQLEMKK 180
  181 PVKNKVCGHT YEEEAIVRMI ESKHERKKKA CCPKIGCSHV DMRMSDLIQD EALRRAIESH 240
  241 KKRRRQSN

Type	Start	End	Confidence
Signal Peptide	1	24	0.91
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	248	0.99