YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74356497
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLEVLFAS AAPAITCAQD ALVCFLHWEV VTHGYYGLGA GDQPGPNDKK SELLPVEWNS  60
   61 NKDLYVLRYE SKDGSRKLLV KAVTVENSMI INVLEHGSQQ VSDLTLNLND YIDSEHLVDF 120
  121 HRVYKNSEEL RSRIVSGIIT PIHEQWEKAN LSPHREFPPA TAREVDPLRI HPQHPHTSRQ 180
  181 PTWCDPLGPF AVGGEDLDPF GCWRGGMIVD PLRSGFPRAL IDPSSGLPNR LPPGAVPPGA 240
  241 RFDPFGPIGT SPSGPNPDHL PPPGYDDMYL

Type	Start	End	Confidence
Signal Peptide	1	18	0.89
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	270	0.99