YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116004241, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARVLRAGG AASASGFLRR ASPGSLLPGL RKLTSSDNRP REDSWLKSLF VRKVDPRKDA  60
   61 HSNLLAKKET SSLYKLQFHN VKPECLEAYN KICQEVLPRI HEDKHYPCTL VGTWNTWYGE 120
  121 QDQAVHLWRY EGGYPALTEV MSKLKENQEF SEFRKARSNM LLSRKNQLLL EFSFWNEPIP 180
  181 RSGPNIYELR SYQLRPGTMI EWGNYWARAI RFRQDGNEAV GGFFSQIGQL YMVHHLWAYK 240
  241 DLQTREDIRN AAWHKHGWEE LVYYTVPLIQ EMESRIMIPQ KTSPLQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.80
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	286	0.99