YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74356375
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDYAALSDS ELAAVLRQYN IPHGPVVGST RKLYEKKIFE YESQRRRLSP PSSSASSFSY  60
   61 RFSDLDSASV DSDMYDLPKK EDALLYQSKG YNDDYYEESY LTTRTYGEPE SMGTSKGFRQ 120
  121 PSASLSDADP FHRQVRDDNL FSLEEEGKDR ERLLYGQDSA YQNIAHYRPI SNISRSSLGL 180
  181 SYYPTSSSTS SVSSSSSSAP SWLTRRAIRP EKQAPGAAGL GQDRQVPLWG QVLLFLVFAA 240
  241 FLLFVYYFMQ AEDGNPFWAE P

Type	Start	End	Confidence
Cytoplasmic	1	227	0.79
Transmembrane Helix	228	249	0.93
Non-Cytoplasmic	250	261	0.83