YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ELOV5_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHFDASLST YFRAWLGPRD TRVEGWFLLD NYVPTLVCSI LYLLIVWLGP KYMKTRQPFS  60
   61 CRGILVVYNL GLTLLSLYMF CELVTGVWEG QYNFFCQGTR SGGEADMKII RVLWWYYFSK 120
  121 LIEFMDTFFF ILRKNNHQIT VLHVYHHASM LNIWWFVMNW VPCGHSYFGA TLNSFIHVLM 180
  181 YSYYGLSSIP SMRPYLWWKK YITQGQLLQF VLTIIQTSCG VIWPCTFPLG WLYFQIGYMI 240
  241 SLITLFTNFY IQTYNKKGVS RRREHQKDHQ NGSVAAVNGH ISSFSSLENN VKPRKQRKD

Type	Start	End	Confidence
Non-Cytoplasmic	1	31	0.86
Transmembrane Helix	32	49	0.92
Cytoplasmic	50	63	0.77
Transmembrane Helix	64	85	0.86
Non-Cytoplasmic	86	112	0.89
Transmembrane Helix	113	132	0.71
Cytoplasmic	133	140	0.67
Transmembrane Helix	141	158	0.69
Non-Cytoplasmic	159	164	0.65
Transmembrane Helix	165	186	0.81
Cytoplasmic	187	206	0.75
Transmembrane Helix	207	227	0.91
Non-Cytoplasmic	228	233	0.73
Transmembrane Helix	234	254	0.92
Cytoplasmic	255	299	0.99