YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73586677
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRSRRRSATG QGSGSDLRGH LYTVPIREQG NIYKPNNKAM AEEMNEKQVY DAHTKEIDLV  60
   61 NRDPKHLNDD VVKIDFEDVI AEPEGTHSFD GIWKASFTTF TVTKYWFYRL LSALFGIPMA 120
  121 LIWGIYFAIL SFLHIWAVVP CIKSFLIEIQ CISRVYSIYV HTFCDPLFEA IGKIFSNIRI 180
  181 NTQKEI

Type	Start	End	Confidence
Cytoplasmic	1	105	0.91
Transmembrane Helix	106	138	0.74
Non-Cytoplasmic	139	186	0.60