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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74057779, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSHSIGIE GMTCASCATR VEKALRQLPG VTDACVNLAT ETATVTGDAD LAAVQQAIEK  60
   61 TGFSVPTESL TLAITGMTCA SCSARVEKAL ARVPGVVGAS VNLATEQATV DVARGTSPAA 120
  121 LIAAVERAGY GAQLPQQAAA APAPAAALPD WWPVALAMAL SAPLVAPMLA SLAGAHWMLP 180
  181 GWLQLALATP VQFWLGARFY RAGWKALRAG SGNMDLLVAV GTSAAWGLSV YLLLTRDDPM 240
  241 HLYFEASAVV ISLVLLGKWL EARAKRQTTE AIRALQALRP ATARVRVDGV DRDVPIEAIR 300
  301 VGDLVVIRPG ERVPVDGEVI EGTSQVDESL LTGESLPVDK QPGAGLTGGA INAHGVLVAR 360
  361 TTAVGAETTL ARIIRLVENA QAAKAPIQRL VDKVSAVFVP VVMVIALVTF IGWWAWGGSA 420
  421 EQAILNAVAV LVIACPCALG LATPTAIMAG TGVAARHGIL IKDAEALELA HSIDTVVFDK 480
  481 TGTLTDGTPH LAAHVAAPGE DANRLLALAA GLQRGSEHPL ARAVLAASDA AGLAPLPAEA 540
  541 QQALPGRGIA GKVEGTGYWL GNRRLMQDQQ VDTSALDPAA REHEAAGRSV SWLARADERR 600
  601 LLGLLAFADA VKPSAAQAVA KLKAQGVETA MLTGDNRGAA AYAAQALGVE NVFAEVLPED 660
  661 KAGHVGALKG RGRTVAMVGD GVNDAPALAA ADVGIAMSSG SDVAMHTAGV TLMRGDPALV 720
  721 ADAIDISKRT YAKIRQNLFW AFVYNVVGIP LAAAGLLSPV IAGAAMAFSS VSVVTNALTL 780
  781 KRWRPAEDRR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle