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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74056646, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNLSKNVAI WLIIAVILMT VFNQFGAQRS AQSQIPYSQF IEEVRQQQIA KVVIEGNVLK  60
   61 GERSDGQRFT SYAPSDPWMV SDLLKNGVMV EAKPEEQPSF LMSLFISWFP MLLLIGVWIF 120
  121 FMRQMQGGGR GGAFSFGKSR ARLLDENANP VTFADVAGCD EAKEDVAELV DFLKDPSKFQ 180
  181 KLGGRIPRGV LMVGPPGTGK TLLARSIAGE AKVPFFSISG SDFVEMFVGV GAARVRDMFE 240
  241 QAKKNAPCII FIDEIDAVGR QRGAGLGGGN DEREQTLNQL LVEMDGFEAT TGVIVIAATN 300
  301 RPDVLDPALL RPGRFDRQVV VGLPDIRGRE QILLVHMRKV PVAPDVRADI LARGTPGMSG 360
  361 ADLANLVNEA ALFAARGNKR LVDMDDFEQA KDKILMGAER KSMVITPEDK KKTAYHESGH 420
  421 AVIGMSLPGC DPVHKVTVIP RGRALGVTMS LPEIDRFSLY KDQMLAQISM LFGGRVAEEI 480
  481 FVGSVSTGAS NDFERATSIA RDMVTRYGMS EALGPMVYGE NEGEVFLGRS VTTHKNMSEA 540
  541 TMQKVDAEIR RILDEQYDVA RKILTDNRDK VEAMTAALLE FETIDAEQIA DIMAGRPVRP 600
  601 PRPSAPPQPP ASGGDKPSAP APTAHPAQET 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle