YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74316979, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKITVIGTGY VGLVTGTCLA EVGNDVLCLD LDPKKIETLK AGGIPIYEPG LEDMVQRNVA  60
   61 AGRLHFTTDI EESVAFGQIQ FIAVGTPPDE DGSADLQYVV AAARNIGRHM DDYKLVVDKS 120
  121 TVPVGTADKV RAALAEELAR RGAAIEFNVA SNPEFLKEGA AVEDFMKPDR IVIGTDSERA 180
  181 TQLLRQLYAP FQRNHERLRV MDVRSAELTK YAANAMLATR ISFMNELAVL AEKLGADIEQ 240
  241 VRHGIGSDPR IGYDFLYAGC GYGGSCFPKD VQALRRTGQE NGVPLRVLDA VEEANDAQKQ 300
  301 ILVNKLVARF GNDLEGRRFA MWGLAFKPNT DDMREAPSRT MLDALWAMGA SVSAYDPAAM 360
  361 DETRRIYGER ADLQLVDSPM DALKGADALL IVTEWKVFRS PNFDTLKSLL KAPLIFDGRN 420
  421 LYEPRAMREM GFDYFPIGRP

Type	Start	End	Confidence
Signal Peptide	1	20	0.86
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	440	0.99