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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74056306, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKPMTLTRL TLALAAVFVT HAASAEAPFV VKDIRVEGIQ RTEAGTVFSY LPVKVGDTMT  60
   61 DEKTAAAIKA LYATGFFKDV RLEARDGVVI VTVQERPSIA KITLSGIKEF SEDDLKAGLK 120
  121 QTGLAEGRVL DRSLVEKAEQ ELQRQYFNRG KYAVEIKSTL TPLERNRVAV QFDVVEGDSA 180
  181 KIRQINIVGN KAFKEKELLN QLTSTTPNWL TWYTKNDQYS KTRLAGDLEA LRSFYLNRGY 240
  241 LEFNVDSTQV SISPDKQGIY ITVNVTEGPQ YRVSDVKLAG QMLVPEAELR KLITLEPGEV 300
  301 FERDRLTEST KKIGDRLGND GYAFANVNAV PELDKEKSTV AFTLFVDPGR RVYVNRINVA 360
  361 GNTRTRDEVV RREIRQMEGA YYDAEKINRS RDRLNRLGYF NEVNIETPSV AGTTDQVDVN 420
  421 VSVAEKSTGN IMLGAGFSSS EGLVLSGSVS QSNVFGTGNR LSAQINSGSV NTVYSLSYTN 480
  481 PYYTIDGISL GYDIYRRDVD ASELDGVGDY ETSTYGAGVR FGLPINERDF ISFGLTYEQT 540
  541 SITTDADSPT NYQKFEEEFG SDNDTVRVDT SWARDTRNSH LFPTRGLFQR VAAEVGTPLG 600
  601 SLEYYKLSFQ HQQYFPLSKR FTLMLNGEVG VGGGLSDKPL PFFKNFYAGG TSSVRGFENG 660
  661 TLGPKDDENN ALGGDKRVVG NAELFFPLPG LKDDQSLRMS AFVDAGATFG PNDDQHRYEN 720
  721 FAFGDLRYSA GVAVLWVSPL GPLKFSLAQP LSSKEDDEEE MFQFTLGNVF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle