YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|159129536
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLSLAGAHH RFSSSTPYDD SLAYVCHQTL LATLSYIIHL SPFSYTLKCS IWSSSCHSLV  60
   61 PVYYDRWLAD PATMKLISTA ATLFVCLAPL SASARSISFF DSTQAPIQLE TFPVKGDNPL 120
  121 VYCSDPSGNI LQIESVDLVP NPPLPGQTLS INASGNLKER VEEGAYVALE VKYGLITLIK 180
  181 QTADLCEQIK NVDLECPLEK GEMTLTKQVD LPSHIPPGKY NVHADVYTKD GKKITCLDAH 240
  241 DIEFKIRP

Type	Start	End	Confidence
Cytoplasmic	1	75	0.51
Transmembrane Helix	76	94	0.69
Non-Cytoplasmic	95	248	0.81