YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86283494, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVLFDRIAL IGIGLIGSSL AHDIRRLGLT KEIVVATRSA DTLKRAEELG LGDRYTTSSQ  60
   61 EAVRDADLVI VSVPVGASES VAKEIAGSLK PGAIVTDVGS TKASVIAQMQ PHMPDSVHFI 120
  121 PGHPLAGTEK SGPDAGFPGL FEGRWCIFTP VAGTDETALK RLRGFWEALG SKVDEMDAEH 180
  181 HDKVLAIVSH LPHIIAYNIV GTADDLETVT ESEVIKYSAS GFRDFTRLAA SDPTMWRDVC 240
  241 LHNRDAILEM LARFSEDLAY LQRAIRWGEG DKIFELFTRT RAIRRSIVQA GQDVDAPDFG 300
  301 RPHPLDKK

Type	Start	End	Confidence
Signal Peptide	1	21	0.95
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	308	0.99