YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86282639, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPILSKTLV MTALLALPLG SAAPALAQEA KPREAVISVT GDGESAVAPD MAIVNLAVVK  60
   61 QAKTAREALD ENNKAMNDVL KALKDGGIAE RDLQTSGFSI QPQYNYPQPV DGQQQQPQLI 120
  121 GYQTINSVTV RLRDLSKLGQ VIDQSVTLGI NQGGDIQFTN DKPEAAFEEA RKNAVAEAVK 180
  181 KAKTLSEAAG VKLGRILEIN ENVPRPLPQP AYRATMMKEA DAAAVPVQGG ENNYTVSVTV 240
  241 TFAIEQ

Type	Start	End	Confidence
Signal Peptide	1	27	0.99
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	246	0.99