YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86357116, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRAYSLPN LLTYGRILAV PLIVLCFFVE GRLSISNTAR WVALWIFIIA SITDFLDGYL  60
   61 ARIWNQTSNI GRMLDPIADK LLVASILLLV AADQTIAGWS IWAAIIILCR EILVSGLREY 120
  121 LAALKVSVPV TRIAKWKTTL QLVAIAFLLA GPAGDEIFPY TTQTGIALLW IAALLTIYTG 180
  181 YDYFRAGLKH IVDDEE

Type	Start	End	Confidence
Cytoplasmic	1	11	0.56
Transmembrane Helix	12	33	0.87
Non-Cytoplasmic	34	40	0.46
Transmembrane Helix	41	61	0.92
Cytoplasmic	62	76	0.46
Transmembrane Helix	77	92	0.60
Non-Cytoplasmic	93	94	0.48
Transmembrane Helix	95	114	0.78
Cytoplasmic	115	132	0.76
Transmembrane Helix	133	154	0.80
Non-Cytoplasmic	155	160	0.75
Transmembrane Helix	161	181	0.88
Cytoplasmic	182	196	0.90