YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86281129, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKVDTKPN ALWENIKVII QALILAMVIR TVLFQPFTIP SGSMMPTLLV GDYIFVNKFA  60
   61 YGYSKYSLPF SPDIFSGRIF GSDPKRGDIV VFRFPPNPDV DYIKRCVGLP GDHIQVTDGV 120
  121 LYVNGKPVPK VPDGSFTSDY KLDPGEDVPV FRETLDNGKT YDTLDNSPVS RGDNTREFIV 180
  181 PEGHYFMMGD NRDNSADSRF EVGFVPAENL VGRASVIFFS LGNDTSFREV WKWPTNMRWD 240
  241 RLFKVVE

Type	Start	End	Confidence
Cytoplasmic	1	17	0.67
Transmembrane Helix	18	34	0.78
Non-Cytoplasmic	35	247	0.81