YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86355908, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQELEQAIG IRIRTLRLEK GLTLDELAEA SGVSRAMISR IERAEASPTA SLLARVCAAL  60
   61 GLSLSAFFAE EGQQASPLAR RQEQQVWRDP ETGYLRRAVS APGTASVVDI VEVEFPPGAR 120
  121 VSFPPHAASH GMTQHVWLFD GELEMTTSEM VYRLRPGDCL FMPVGEGHSF HNPGNAPARY 180
  181 CVVLDRGGR

Type	Start	End	Confidence
Cytoplasmic	1	48	0.53
Transmembrane Helix	49	69	0.50
Non-Cytoplasmic	70	189	0.98