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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169158300, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRLLDSRTL LLLVATHSVL LSLVRCQQED DQEEFGGCVQ DGQQYADRAV WKPEPCRVCV  60
   61 CDSGTVLCDE VICEDLNDCA NPIISPGECC PICPADTDDP IGSLGAKGQK GEPGDITDVV 120
  121 GPRGPAGPMG PPGEQGTRGE RGAKGEKGSP GPRGRDGEPG TPGNPGPPGP PGPNGPPGLG 180
  181 GNFAAQMAGG FDEKAGGAQM GVMQGPMGPM GPRGPPGPSG APGPQGFQGN PGETGEPGPA 240
  241 GALGPRGPPG PPGKPGSDGE AGKPGKAGER GPPGPQGARG FPGTPGLPGI KGHRGHPGLD 300
  301 GAKGEAGAAG AKGEAGSNGE SGAPGPMGPR GLPGERGRPG ATGAAGARGN DGLPGPAGPP 360
  361 GPVGPAGAPG FPGSPGSKGE AGPTGARGPE GAQGPRGEAG TPGSPGPAGA SGNPGTDGIP 420
  421 GAKGSAGASG IAGAPGFPGP RGPPGPQGAT GPLGPKGQSG DPGIPGFKGE AGPKGERGVL 480
  481 GPQGPPGPSG EEGKRGPRGE PGSAGPLGPP GERGAPGNRG FPGQDGLAGA KGAPGDRGVP 540
  541 GLSGPKGGTG DPGRPGEPGL PGARGLTGRP GDAGAQGKVG ATGAPGEDGR PGPPGPLGAR 600
  601 GQPGVMGFPG PKGANGEPGK PGEKGLVGRT GLRGLPGKDG ETGPSGPPGP VGAVGERGEQ 660
  661 GQPGPSGFQG LPGPTGAPGE PGKPGDQGVP GEGGAAGPTG PRGERGFPGE RGGAGPQGLQ 720
  721 GPRGLPGTPG TDGPKGAIGP AGAAGAQGPP GLQGMPGERG AVGISGAKGD RGDSGEKGPE 780
  781 GAPGKDGSRG LTGPIGPPGP SGPNGAKGET GPIGSIGAPG ARGAPGDRGE IGAPGPAGFA 840
  841 GPPGADGQPG NKGEQGESGQ KGDSGAPGPQ GPSGAPGPVG PTGVTGPKGA RGAQGAPGAT 900
  901 GFPGAAGRVG PPGPNGNPGA AGPAGPSGKD GPKGVRGDAG PPGRAGDAGL RGPPGAPGEK 960
  961 GEAGEDGPPG PDGPSGPAGL AGQRGIVGLP GQRGERGFPG LPGPSGEPGK QGAPGGSGDR1020
 1021 GPPGPVGPPG LTGPAGETGR EGNPGSDGPP GRDGAAGVKG ERGNTGPIGA PGAPGAPGAP1080
 1081 GSVGPIGKQG DRGENGPQGP AGPPGPAGAR GMVGPQGPRG DKGEAGEAGE RGQKGHRGFT1140
 1141 GLQGLPGPPG SPGDQGAAGP AGPSGAKGPS GPVGPAGKDG SNGQPGPIGP PGPRGRSGES1200
 1201 GPVGPPGNPG PPGPPGPPGP GIDMSAFAGL SQPEKGPDPL RYMRADEASS SLRQHDVEVD1260
 1261 ATLKSINGQI EDIRSPDGSR KNPARSCRDL KLCHPEWKSG DYWVDPNLGS AADAIKVFCN1320
 1321 METGETCVKP STPKIPRKNW WTSKSKAQKH VWFGESMNGG FHFSYADGSQ TPSTTTIQLN1380
 1381 FLRLLSTEAT QTITYHCKNS VAYMDQATGN LKKAILLQGS NDVEIRAEGN SRFTYGVLED1440
 1441 GCKKHTGQWA KTVIEYKTQK TSRLPIMDIA PMDIGGADQE FGVDIGAVCF L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle