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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86284387, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTKHDHHHG HAHGDDDHSH CSHDRGKVAD TVIRDPVCGM TVNPQAGKPT LTHADRLYHF  60
   61 CSESCRTKFA AAPQDYLTAK DPVCGMTVDR STAKHFLKVE GEKFYFCSAG CKTKFEADPT 120
  121 AYRDGNRPVA KPAPKGTLYT CPMHPEVISD RPGDCPKCGM ALEPMGIPPA DEGPNPELVD 180
  181 FTKRLWVSAI LALPLLALGM GPMLGLPLRE AIGEPQASYI ELLLATPVVL WAALPFFRRA 240
  241 WASLVNRSPN MWTLIGLGVG TAYVYSLVAT LAPGIFPMSF RGHGASVPVY FEAAAVIVAL 300
  301 VFVGQVLELK ARERTGSAIR ALLDLSPKTA RRIAADGSES DLPVEEIQTG DRLRVRPGER 360
  361 IPVDGSVVEG QSTVDESMIT GEPLPVEKSK GDGLTGGTIN KNGSLVMSAE KVGADTVLSR 420
  421 IVDMVATAQR SRAPIQGAVD RVSAFFVPAV VVTAILAFIV WAAIGPEPSL ADALLAAVAV 480
  481 LIIACPCALG LATPMSIMIA TGRGAGEGVL IKDAEALERF SKVDTLIVDK TGTLTEGKPK 540
  541 LTDIVALGGT EESRLLSLAA SLERGSEHPL AEAIISGAEE RGVTFVEITG FEAKTGKGVK 600
  601 GLVDGTSIAL GNAAMLADLG IDPAALSEKT EALRGDGKTV MFVTLDGTLA GLVAVADRIK 660
  661 PTTAVAIKAL HESGMKIIMA TGDNERTARA VAKSLGIDEV RADVLPEGKK ALIEELRANG 720
  721 AVVAMAGDGV NDAPALASAD VGIAMGTGAD VAMESAGITL VKGDLNGIVR ARRLAEATMR 780
  781 NIRQNLGFAF GYNALGVPVA AGVLYPIFGL LLSPMIAAAA MSLSSVSVIA NALRLRFAKS 840
  841 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle