YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86283929, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRCFERYRV HLNRLSLSNA VMRLVSGYAP SVGGAMGWSM FSFGPAAAQS AGGGTDPATM  60
   61 VSNICTFILG PFGQSLAVLG IVAIGLSWMF GRASLGLIAG VVGGVVIMFG ASFLGKTLTG 120
  121 GG

Type	Start	End	Confidence
Cytoplasmic	1	20	0.94
Transmembrane Helix	21	41	0.94
Non-Cytoplasmic	42	63	0.84
Transmembrane Helix	64	86	0.87
Cytoplasmic	87	94	0.69
Transmembrane Helix	95	115	0.93
Non-Cytoplasmic	116	122	0.83