YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70872075
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALGIPLFA KLWFILTAPL LLIDATFVFT RSSSTGVPHP LAGTPPFNLW VLYSTYDRRY  60
   61 APNDDAFVVM QSLMNVLEAA LGLFAFLLAE RGKAIASLKL ALVVGVMTLY KTLMYFSLEA 120
  121 IEGGKYTKHN STFDTLMMFV LPSSLWIIVP AAIILQCSCR LPIAASGRTV ASQGKKKNM

Type	Start	End	Confidence
Cytoplasmic	1	8	0.89
Transmembrane Helix	9	30	0.88
Non-Cytoplasmic	31	66	0.87
Transmembrane Helix	67	88	0.90
Cytoplasmic	89	94	0.87
Transmembrane Helix	95	114	0.89
Non-Cytoplasmic	115	138	0.81
Transmembrane Helix	139	159	0.86
Cytoplasmic	160	179	0.84