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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71410253
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKTVVGASR MFWLMFFVPL LLALCPSEPA HALAPESSRV ELFKRQSSKV PFEKDGKVTE  60
   61 RVVHSFRLPA LVNVDGVMVA IADARYETSN DNSLIDTVAK YSVDDGETWE TQIAIKNSRA 120
  121 SSVSRVVDPT VIVKGNKLYV LVGSYNSSRS YWTSHGDARD WDILLAVGEV TKSTAGGKTT 180
  181 ASIKWGSPVS LKKFFPAEME GMHTNQFLGG AGVAIVASNG NLVYPVQVTN KKKQVFSKIF 240
  241 YSEDEGKTWK FGKGRSDFGC SEPVALEWEG KLIINTRVDW TRRLVYESSD MGNTWVEAVG 300
  301 TLSRVWGPSP KSDQPGSQSS FTAVTIEGMR VMLFTHPLNF KGRWLRDRLN LWLTDNQRIY 360
  361 NVGQVSIGDE NSAYSSVLYK DDKLYCLHEI NTNEVYSLVF ARLVGELRII KSVLQSWKNW 420
  421 DSHLSSICTP ADPAASSSER GCGPAVTTVG LVGFLSGNAS QNVWEDAYRC VNASTANAER 480
  481 VPNGLKFAGV GGGALWPVSQ QGQNQRYRFA NHAFTLVASV TIHEAPRDAT PLLGASLDSS 540
  541 GGKKLLGLSY DEKHQWQPIY GSTPVTPTGS WETGKRYHVV LTMSNKIGSV YIDGEPLEGS 600
  601 GQTVVPDGRT PDISHFYVGG YKRSDMPTIS HVTVNNVLLY NRQLNAEEIR TLFLSQDLIG 660
  661 TEAHMDSSSD SSAHGTPSIP VDSSAHGTPS TPVDSSAHAT PSTPVDSSAH STPSTPVDSS 720
  721 AHGTPSTPVD SSAHGTPSTT VDSSAHGTPS TPVDSSAHGT PSTTVDSSAH ATPSTPVDSS 780
  781 AHSTPSTPVD SSAHGTPSTP VDSSAHGTPS TPVDSSAHGT PSTPVDSSAH GTPSTPVDSS 840
  841 AHGTPSTPVD SSAHGKPSTP VDSSAHGTPS TPVDSSAHST PSTPADSSAH STPSTPAGNG 900
  901 ANGTVLILPD GAALSAFSGG GLLLCACALL LHVFFTAVFF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle