YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68532885
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAALRSAYA LAAALLLAAA VVDVFIVDAR VPGVYSGSEW QQAHATFYGG SDASGTMGGA  60
   61 CGYGNLYSQG YGVQTAALST ALFNQGLSCG ACFEIKCAND PQWCHGGGPS IFITATNFCP 120
  121 PNYALPSDNG GWCNPPRPHF DLAMPMFLKI AQYRAGIVPV QYRRVPCRKS GGIRFTINGH 180
  181 RYFNLVLITN VAGAGDIVRV SVKGTKTGWM PMSRNWGQNW QSNAVLVGQA LSFRVTGSDH 240
  241 RTSTSWNVVP ANWNFGQTFS GKNFRV

Type	Start	End	Confidence
Signal Peptide	1	29	0.85
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	266	0.99