YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68444965
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSFRCFKKY ACLICICSFI AASVVSPKAA HAFSNQVIQH GAVGDDVIEL QSRLQYLGYY  60
   61 NGKIDGVFGW STYWALRNFQ YEFGIKKIDG LAGWQTKIKL ANATKYHENY VKNQIRKGNK 120
  121 FTHYGGQPLD QQSKGSGSSG KSRVNNGQQK AQSGSSQAKK PASQPQRNTS KGNSEQQKEK 180
  181 AQKPTAVNVP SGFSQNDIQL MANAVHGEAR GEPYNGQVAV AAVILNRVNS PSFPNTVAGV 240
  241 IFEPRAFTAV ADGQIWLEPN PTSKKAVMDA INGWDPTGNA IYYFNPDTAT SAWIWSRPQI 300
  301 KQIGKHIFCR

Type	Start	End	Confidence
Signal Peptide	1	32	0.98
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	310	0.99