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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|63029829
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CVFWNHSIMV AGGGAWSSKG CELVSRNSTH ISCQCSHMSS FAILMDISKR EHGDVLPLKV  60
   61 VTYTTVSASL VAPLITFLLL AILRKLRSNL HSIHKNLVAS IFLSEFIFLT GINQTDSPFV 120
  121 CTVVAILLHY SYMCAFAWMF VEGLHIYRML TEMRNINQGH MRFYYAIGWG IPAIITGLAV 180
  181 GLDPQGYGNP DFCWLSVYDT LIWSITGPIS IVVLINIVLI VLAAKASCGR RQRTEKSGAI 240
  241 SALRVAFLLL LLISATWLLG LMAVNSDVLS FHYLFAILSC LQGICIFFFH CILNKDVRRN 300
  301 LKSVFTGKNI PAEDPSVTRA TLLTRSLNGD VYMEDGGLYR TTIGESSVSL QSSVRSGKSH 360
  361 GSSYLASTFR EKKRSISSNG GHVGHDEVDS TLFFHKSKKK EDSDSDSELS ADEHSSSYAS 420
  421 SHSSDSEDEE RHSKTKWNNE RTPIHSTPKV DGVSGHGKPY WPEEMPTASE SEDMVRPEKL 480
  481 RVETKVNVEL HQGNKLNHNG DLSQSEGPPS QPNSNQLPRR GILKNKITYS PPLTDKNMKN 540
  541 LLREKLSDYN PPQISRKNPS PGSNEGLHSG PETPSIIIKP PPVPPKPALN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle