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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57157820
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALLILALV GAAVADYKDD DDKLAAANSS IDRSDIGTAG PMGELRWKAE KAPSSQSWIT  60
   61 FSLKNQKVSV QKSTSNPKFQ LSETLPLTLQ IPQVSLQFAG SGNLTLTLDR GILYQEVNLV 120
  121 VMKVTQPDSN TLTCEVMGPT SPKMRLILKQ ENQEARVSRQ EKVIQVQAPE AGVWQCLLSE 180
  181 GEEVKMDSKI QVLSKGLNQT MFLAVVLGSA FSFLVFTGLC ILFCVRCRHQ QRQAARMSQI 240
  241 KRLLSEKKTC QCSHRMQKSH NLMDPVVLQR RDWENPGVTQ LNRLAAHPPF ASWRNSEEAR 300
  301 TDRPSQQLRS LNGEWRFAWF PAPEAVPESW LECDLPEADT VVVPSNWQMH GYDAPIYTNV 360
  361 TYPITVNPPF VPTENPTGCY SLTFNVDESW LQEGQTRIIF DGVNSAFHLW CNGRWVGYGQ 420
  421 DSRLPSEFDL SAFLRAGENR LAVMVLRWSD GSYLEDQDMW RMSGIFRDVS LLHKPTTQIS 480
  481 DFHVATRFND DFSRAVLEAE VQMCGELRDY LRVTVSLWQG ETQVASGTAP FGGEIIDERG 540
  541 GYADRVTLRL NVENPKLWSA EIPNLYRAVV ELHTADGTLI EAEACDVGFR EVRIENGLLL 600
  601 LNGKPLLIRG VNRHEHHPLH GQVMDEQTMV QDILLMKQNN FNAVRCSHYP NHPLWYTLCD 660
  661 RYGLYVVDEA NIETHGMVPM NRLTDDPRWL PAMSERVTRM VQRDRNHPSV IIWSLGNESG 720
  721 HGANHDALYR WIKSVDPSRP VQYEGGGADT TATDIICPMY ARVDEDQPFP AVPKWSIKKW 780
  781 LSLPGETRPL ILCEYAHAMG NSLGGFAKYW QAFRQYPRLQ GGFVWDWVDQ SLIKYDENGN 840
  841 PWSAYGGDFG DTPNDRQFCM NGLVFADRTP HPALTEAKHQ QQFFQFRLSG QTIEVTSEYL 900
  901 FRHSDNELLH WMVALDGKPL ASGEVPLDVA PQGKQLIELP ELPQPESAGQ LWLTVRVVQP 960
  961 NATAWSEAGH ISAWQQWRLA ENLSVTLPAA SHAIPHLTTS EMDFCIELGN KRWQFNRQSG1020
 1021 FLSQMWIGDK KQLLTPLRDQ FTRAPLDNDI GVSEATRIDP NAWVERWKAA GHYQAEAALL1080
 1081 QCTADTLADA VLITTAHAWQ HQGKTLFISR KTYRIDGSGQ MAITVDVEVA SDTPHPARIG1140
 1141 LNCQLAQVAE RVNWLGLGPQ ENYPDRLTAA CFDRWDLPLS DMYTPYVFPS ENGLRCGTRE1200
 1201 LNYGPHQWRG DFQFNISRYS QQQLMETSHR HLLHAEEGTW LNIDGFHMGI GGDDSWSPSV1260
 1261 SAEFQLSAGR YHYQLVWCQG ILATMKKPEL TATSVEKFLI EKFDSVSDLM QLSEGEESRA1320
 1321 FSFDVGGRGY VLRVNSCADG FYKDRYVYRH FASAALPIPE VLDIGEFSES LTYCISRRAQ1380
 1381 GVTLQDLPET ELPAVLQPVA EAMDAIAAAD LSQTSGFGPF GPQGIGQYTT WRDFICAIAD1440
 1441 PHVYHWQTVM DDTVSASVAQ ALDELMLWAE DCPEVRHLVH ADFGSNNVLT DNGRITAVID1500
 1501 WSEAMFGDSQ YEVANIFFWR PWLACMEQQT RYFERRHPEL AGSPRLRAYM LRIGLDQLYQ1560
 1561 SLVDGNFDDA AWAQGRCDAI VRSGAGTVGR TQIARRSAAV WTDGCVEVLA DSGNRRPSTR1620
 1621 PDREMGEAN

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