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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57157779
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CPLPGPTAVD GTAGPMGELR WKAEKAPSSQ SWITFSLKNQ KVSVQKSTSN PKFQLSETLP  60
   61 LTLQIPQVSL QFAGSGNLTL TLDRGILYQE VNLVVMKVTQ PDSNTLTCEV MGPTSPKMRL 120
  121 ILKQENQEAR VSRQEKVIQV QAPEAGVWQC LLSEGEEVKM DSKIQVLSKG LNQTMFLAVV 180
  181 LGSAFSFLVF TGLCILFCVR CRHQQRQAAR MSQIKRLLSE KKTCQCSHRM QKSHNLMDPV 240
  241 VLQRRDWENP GVTQLNRLAA HPPFASWRNS EEARTDRPSQ QLRSLNGEWR FAWFPAPEAV 300
  301 PESWLECDLP EADTVVVPSN WQMHGYDAPI YTNVTYPITV NPPFVPTENP TGCYSLTFNV 360
  361 DESWLQEGQT RIIFDGVNSA FHLWCNGRWV GYGQDSRLPS EFDLSAFLRA GENRLAVMVL 420
  421 RWSDGSYLED QDMWRMSGIF RDVSLLHKPT TQISDFHVAT RFNDDFSRAV LEAEVQMCGE 480
  481 LRDYLRVTVS LWQGETQVAS GTAPFGGEII DERGGYADRV TLRLNVENPK LWSAEIPNLY 540
  541 RAVVELHTAD GTLIEAEACD VGFREVRIEN GLLLLNGKPL LIRGVNRHEH HPLHGQVMDE 600
  601 QTMVQDILLM KQNNFNAVRC SHYPNHPLWY TLCDRYGLYV VDEANIETHG MVPMNRLTDD 660
  661 PRWLPAMSER VTRMVQRDRN HPSVIIWSLG NESGHGANHD ALYRWIKSVD PSRPVQYEGG 720
  721 GADTTATDII CPMYARVDED QPFPAVPKWS IKKWLSLPGE TRPLILCEYA HAMGNSLGGF 780
  781 AKYWQAFRQY PRLQGGFVWD WVDQSLIKYD ENGNPWSAYG GDFGDTPNDR QFCMNGLVFA 840
  841 DRTPHPALTE AKHQQQFFQF RLSGQTIEVT SEYLFRHSDN ELLHWMVALD GKPLASGEVP 900
  901 LDVAPQGKQL IELPELPQPE SAGQLWLTVR VVQPNATAWS EAGHISAWQQ WRLAENLSVT 960
  961 LPAASHAIPH LTTSEMDFCI ELGNKRWQFN RQSGFLSQMW IGDKKQLLTP LRDQFTRAPL1020
 1021 DNDIGVSEAT RIDPNAWVER WKAAGHYQAE AALLQCTADT LADAVLITTA HAWQHQGKTL1080
 1081 FISRKTYRID GSGQMAITVD VEVASDTPHP ARIGLNCQLA QVAERVNWLG LGPQENYPDR1140
 1141 LTAACFDRWD LPLSDMYTPY VFPSENGLRC GTRELNYGPH QWRGDFQFNI SRYSQQQLME1200
 1201 TSHRHLLHAE EGTWLNIDGF HMGIGGDDSW SPSVSAEFQL SAGRYHYQLV WCQGILATMK1260
 1261 KPELTATSVE KFLIEKFDSV SDLMQLSEGE ESRAFSFDVG GRGYVLRVNS CADGFYKDRY1320
 1321 VYRHFASAAL PIPEVLDIGE FSESLTYCIS RRAQGVTLQD LPETELPAVL QPVAEAMDAI1380
 1381 AAADLSQTSG FGPFGPQGIG QYTTWRDFIC AIADPHVYHW QTVMDDTVSA SVAQALDELM1440
 1441 LWAEDCPEVR HLVHADFGSN NVLTDNGRIT AVIDWSEAMF GDSQYEVANI FFWRPWLACM1500
 1501 EQQTRYFERR HPELAGSPRL RAYMLRIGLD QLYQSLVDGN FDDAAWAQGR CDAIVRSGAG1560
 1561 TVGRTQIARR SAAVWTDGCV EVLADSGNRR PSTRPDREMG EAN

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