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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85822205
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLYGLGIR AVNFIVVFLI VCLIPGLPPR TTFPFVGFKL AANKDLKGAL EPNHHLDNAE  60
   61 RLLNNRVYGP ECLIARNNEI YMGIHGGEVI KVNGDHVTHV TKLGQACEDV FEESRCGRPL 120
  121 GLAFDTKGNN LIIADAYYGI WLVDLKSKKK QLLVSPQQEL PGKTINRPAK LFNDVAVDKE 180
  181 GNIYWTDSSS DFLLQDLVFT AFANPSGRLF KYDRVKNENK VLLDNLYFAN GVALSPEEDF 240
  241 LVVAETGASR LMKYHLKGSN AGKGEVFVEG LPGLPDNLTP NEDGIWVPLI LSVDSQNPSL 300
  301 FAIFTEFPNL RLFLARILYL FEAPFSAINN IYPNRFSQRF VHFIGHGESV SFMIPKRATI 360
  361 VRLDWDGNIV GSLHGFDKSV GAACHVLEFN DYLYLGSPFN RFLARVKSPV QKKPMLQARI 420
  421 NNVRYEGMEI EPSLKPRMEK TTTAPPVVTK PIVTHARSTP TTPKPPVISV KTTGIPSAST 480
  481 TTTTPTRTSL KSSTTEKPST TKTVKSPSME ETRIPKEPAP IIENIPADNV APKQEKLKVI 540
  541 NKHGKHVEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle