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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58257696
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ARHYHSGSPA PGPGPAWPRP VDDDGLAPVS YNLAFSTRPP PTSRMRLWKA VVVTLAFMSV  60
   61 DICVTTAIYV FSHLDRSLLE DIRHFNIFDS VLDLWAACLY RSCLLLGATI GVAKNSALGP 120
  121 RRLRASWLVI TLVCLFVGIY AMVKLLLFSE VRRPIRDPWF WALFVWTYIS LGASFLLWWL 180
  181 LSTVRPGTQA LEPGAATEAE GFPGSGRPPP EQASGATLQK LLSYTKPDVA FLVAASFFLI 240
  241 VAALGETFLP YYTGRAIDGI VIQKSMDQFS TAVVIVCLLA IGSSFAAGIR GGIFTLIFAR 300
  301 LNIRLRNCLF RSLVSQETSF FDENRTGDLI SRLTSDTTMV SDLVSQNINV FLRNTVKVTG 360
  361 VVVFMFSLSW QLSLVTFMGF PIIMMVSNIY GKYYKRLSKE VQNALARASN TAEETISAMK 420
  421 TVRSFANEEE EAEVYLRKLQ QVYKLNRKEA AAYMYYVWGS GLTLLVVQVS ILYYGGHLVI 480
  481 SGQMTSGNLI AFIIYEFVLG DCMESVGSVY SGLMQGVGAA EKVFEFIDRQ PTMVHDGSLA 540
  541 PDHLEGRVDF ENVTFTYRTR PHTQVLQNVS FSLSPGKVTA LVGPSGSGKS SCVNILENFY 600
  601 PLEGGRVLLD GKPISAYDHK YLHRVISLVS QEPVLFARSI TDNISYGLPT VPFEMVVEAA 660
  661 QKANAHGFIM ELQDGYSTET GEKGAQLSGG QKQRVAMARA LVRNPPVLIL DEATSALDAE 720
  721 SEYLIQQAIH GNLQKHTVLI IAHRLSTVEH AHLIVVLDKG RVVQQGTHQQ LLAQGGLYAK 780
  781 LVQRQMLGLQ PAADFTAGHN EPVANGSHKA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle