YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169153934, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTRTRHGII LIGVVTVLTS LLFVYNSTSA DTPGDQLHSD GHQIDAASRQ TFSLEGYISI  60
   61 IDHKPLKTHC RSCALVTSSG HMTGSGRGAE IDETECVIRM NDAPTRRYQK DVGQHTNLRV 120
  121 IAHSSMQRVL RNRYELLNSS QDTFFIFWGP GNYMRRDGKG LVYNNLRLMK QLMPKLQVYI 180
  181 ISRPKMLQFD ELFKKETGKD RKRSNSWLST GWFTMAIAIE MCDRINVYGM VPPEFCKSPH 240
  241 TKPSVPYHYY EPSGTDECTM YVTHEQGRHG SHHRFITEKR VFAKWARMFN IHFYQPDWGP 300
  301 PPVINNNNNT NS

Type	Start	End	Confidence
Signal Peptide	1	30	0.93
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	312	0.99