YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68440713, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METFISFTNQ SQGRDRIFRA TQYACALAKY LLRNEAKRKE LAKKLQLLES NMSSGRKLFR  60
   61 LGNTVNSVQA AKSTLHISDP VLRFCLTVAN LNRALYFICD NILWARSIGL IRDIDKERWS 120
  121 LNSSRFYFLS LVMNLTRDVY AIIQLMVQKS RDRRYQQKAD QHLNESPDVA CVIVPQLDAF 180
  181 LFLLMESLRS QPSVALDTLK NVCDLFIPLD KLGIYQTNAG VVGFCGLVSS LLGILTVLRP 240
  241 TLKIKP

Type	Start	End	Confidence
Non-Cytoplasmic	1	218	0.71
Transmembrane Helix	219	238	0.83
Cytoplasmic	239	246	0.64