YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68391754, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGACVWTLV SVCVFCVCVA YKPVIVVHGL FDSSADFVHL HRFINLSHPG TNVTVLDLFD  60
   61 RSASLQPLWK QVEGFTEAIY PIMQNAADGV HLICYSQGGL VCRGILSTLP DHNVHSFISL 120
  121 SAPQAGQYGD TDYLKYLFPQ FVKSNLFHVC YTAVGQKISI CNYWNDPHHR DMYINSSDYL 180
  181 ALLNNERPNP NSTAWKQNFL RIKKLVLIGG PDDGVITPWQ SSQFGFYDDN ETVVEMKNQK 240
  241 VFLMDLFGLK TLSARGDLAL CSVEGVAHIF WHSNETVYKT CIEKWLT

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	287	0.99