YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68439079
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSKVSCLYV LTVVCWASAL WYLSISRPTS SYVNQLSAPA RKTPKTLKSN ATTTFGNIRT  60
   61 RPLNPHGFDF IINEPKKCET NVPFLVILIT TTHKEFDARQ AIRETWGDES TFSDLRIITL 120
  121 FLLGRSTDVV LNQMVEQESE IFHDIVVEDF IDSYHNLTLK TLMGMRWVAT FCNQAKYVMK 180
  181 TDSDIFVNMD NLVYKLLKPA TKPRRRYFTG YVINGGPIRD MRSKWYMPRD LYPESKYPPF 240
  241 CSGTGYVFSA DVAELIYKTS LHTRLLHLED VYVGVCLRKL GIHPYQNSGF NHWKMAYSLC 300
  301 RYRRVITVHQ ISPEEMHRIW NDMTSKKHLK C

Type	Start	End	Confidence
Signal Peptide	1	19	0.89
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	331	0.99