YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157823669, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAGGPGPAA QSARRPPRRL SSLWSPLLLC VLGVPQGGSG AHTAVISPQD PTLLIGSSLH  60
   61 ATCSIHGDTP GATAEGLYWT LNGRRLPSEL SRLLNTSTLA LALANLNGSR QQSGDNLVCH 120
  121 ARDGSILAGS CLYVGLPPEK PFNISCWSRN MKDLTCRWTP GAHGETFLHT NYSLKYKLRW 180
  181 YGQDNTCEEY HTVGPHSCHI PKDLALFTPY EIWVEATNRL GSARSDVLTL DVLDVVTTDP 240
  241 PPDVHVSRVG GLEDQLSVRW VSPPALKDFL FQAKYQIRYR VEDSVDWKVV DDVSNQTSCR 300
  301 LAGLKPGTVY FVQVRCNPFG IYGSKKAGIW SEWSHPTAAS TPRSERPGPG GGVCEPRGGE 360
  361 PSSGPVRREL KQFLGWLKKH AYCSNLSFRL YDQWRAWMQK SHKTRNQDEG ILPSGRRGAA 420
  421 RGPAG

Type	Start	End	Confidence
Signal Peptide	1	43	0.96
N-region	1	34
H-region	35	40
C-region	41	43
Cleavage Site	43	44
Non-Cytoplasmic	44	425	0.99