YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68397381
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPPARPGSS SLWDMPGTPP EGAQERFETD ARSTSADFSR CGRAVAQLRA PPGLTFILNP  60
   61 QAVSTMHPIE RLCSETQNQP LIKLTGTEAA VVWNEREQVN ISVFKEDRER NDLRPFGLLL 120
  121 ACDITGCVIF PVFSAFPLPF RLHEPASEHA RLLLSAKMRY VAAYLLAALG GKDSPSTGDI 180
  181 KKILESVGIE ADDVRMSKVV AELNGKNVEE VIAQGFSKLA SVPSGGAVAV SSAAAPSSGG 240
  241 SAAAPAAEEK KEEKKEESEE SDDDMGFGLF D

Type	Start	End	Confidence
Cytoplasmic	1	115	0.78
Transmembrane Helix	116	136	0.76
Non-Cytoplasmic	137	271	0.92