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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68397214
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSDMEPLKA VNKFPDNVTE IVQYVPASDT KKVQKRKVTI RGIVAIGLPT ALAIIALITG  60
   61 LLVWHFHFRY NGKVRKMFSG HLTISSQTFS DAYENNNSTE YKELALKVSK QLKSIYGQVH 120
  121 VLSRYHVASS VQGFSEGNNN GIIAYYLSEF NVRESKVSAL EEAIASMDDT ENTRKSRRGF 180
  181 SRMTDSLIID GITSGAVDAR LADRNLKRSS KRSNHAHANQ TDIIRSPGFP DNSYSPNLYT 240
  241 EWQIRADPEH RVRLEFDVLD LEKDCHNDFI KVYDSLAPSE KLVITEKCGY RLPNEKLIFI 300
  301 SSGNVMLVTM VTNEEKNYPG FRAIYSQIPA KIQDCGGRLT GLRGAFTSPG YPSHYPPQIE 360
  361 CVWNIEVPPG KHIKVKFDKF SIHNPEQNII NCPTDYLELN YRICGEKPPK TVYTVKSNQL 420
  421 TVKFNSDRSY VSEGFSAEFE AFEPTNPCPG RFECDNDLCI SSDQHCDGYN DCGDMSDERG 480
  481 CMCNETQIQC KNGFCKPSFW GCDGVNDCGD NTDEENCGNC KTWEFRCRSG RCISAQKQCN 540
  541 GYNDCGDGSD ESRCAKSIAV HCSDSTYKCK NKQCISKLNP MCDGETDCVD GSDEAECKCG 600
  601 KKPHKSSRIV GGKDSDEGEW PWQVSLHMKT QGHVCGASVI SNSWLVTAAH CVQDNDQFRY 660
  661 SQADQWEVYL GLHNQGETSK STQRSVLRII PHPQYDHSSY DNDIALMELD SPVTLNQNIW 720
  721 PICLPDPTHY FPAGKSVWIT GWGKLREGSV PSVLQKAEVR IINSTVCSKL MDDGITPHMI 780
  781 CAGVLSGGVD ACQGDSGGPM SSIEGNGRMF LAGVVSWGDG CGRRNRPGVY TRVTDYRSWI 840
  841 REITGI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle