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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68396549
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLNTTASC NVTLDTDHSY SWPALFILVI IFFTIAGNIL VIMAVSIESK LHNPTNFFLC  60
   61 SLAVADMLVG FLVMPISLIS ILYNHTWPLP QLLCPLWIFL DVLFSTASIM HLCAISLDRY 120
  121 IGIRNPFSIS HTQSSRKAMI KIITVWTISI VLSLPIPVMG LQDEQKVFID CACVLNEPRF 180
  181 ILVGSIVAFF VPLVIMVVCY YLTLHHLQKH SKSFPHDSKS SCMHSSIETS DTSFLNSKSS 240
  241 SKMSAFPVIK RSPLKSRQGM NGALENERRA SKVLGMVFFL FLIMWSVCVQ YLSAVMPLVK 300
  301 RTIEPKHLCR GALPDGVTNE LECVTNSTLA AIIKQLGGLS RHAEDIFGEL FNEANSFYMR 360
  361 MNSLQERVDL LAVKVTQLDS TVEEVSLQDI NMRKAFKSST IQDQQVVSRN SIPNPVMEVY 420
  421 QRCDKPPPLN ILTPYRDDKK DGLKFYTDPS YFFNLWKEKM LQATENKRKE KRRQKQEQKH 480
  481 TEDPTREVKK VRKARNRRQE WNMMAYDKEF RPDTRLTPSP YHGMSSEGSL SPDRSGMSDE 540
  541 HSYPASPNHP QEVGGVGPDG KDGGPTQTQS LDRAYRPAVS SSAASARQHS LGRVQPHHGP 600
  601 PPADSSLNGP RPAAAKDYSG HQMHEHFIPP APPPPPPLIP SSQTAFDSTS GPPSLAPGTM 660
  661 ASLRPYSPSP PPAPPSGYTA SPAHAVMGGP PVAPPPPPPG PPTHAPSPSR AAHPSGDSTL 720
  721 QRKGPVPLIP MSDARSDLLA AIRRGQWIKA NVLSMFVH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle