YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|182890520, gi...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSWVRFSAQ SQAKERVFRA AQYACTLLGY TLQRGGARAE LLNTIKQLEA HMSLTRKLMW  60
   61 LGNSAEALEA AKRTVHLSDC VLRLCITVAH LNRAMYFACD NVLWAGKTGL LPELDQNKWS 120
  121 QRSFRYYLFA LILNLTRDAY EIRLLMERES RGGSAKSFTS SPSPLTPTPE NGEFPSIVSP 180
  181 SSGLSPLPPI PVLSARLNKQ VHLLITVLRN NPPLLLDLLK NMCDIFIPLD RLGLYQTGSG 240
  241 FVGACGLTSS ILSILTIVHP WLKLKP

Type	Start	End	Confidence
Non-Cytoplasmic	1	237	0.66
Transmembrane Helix	238	262	0.78
Cytoplasmic	263	266	0.59