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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68391358
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGLQSTSLG MVPMLSPLHP PPRSGSNSAD SSSEVSPSCC GSEQSSASWP TPSRRXXXXX  60
   61 XXXXXLYLGI VLSAVVIITG CFSYFQEAKS SKIMESFKNM VPQQALVIRE GEKLQINAEE 120
  121 VVGGDLVEVX GXXXXPADLR IISAHGCKVD NSSLTGESEP QTRSPDCTHD NPLETRNIAF 180
  181 FSTNCVEGTA RGIVVCTGDR TVMGRIATLT SGLETGKTPI AKEIEHFIHI ITGVAVFLGV 240
  241 TFFILSIILG YSWLEAVIFL IGIIVANVPE GLLATVTVCL TLTAKRMARK NCLVKNLEAV 300
  301 ETLGSTSTIC SDKTGTLTQN RMTVAHMWFD NQIHEADTTE DQSGASFDKS SGTWLALARV 360
  361 AALCNRAVFK AGQESLPILK RDVAGDASES ALLKCIELSC GSVKAMRDKN KKVAEIPFNS 420
  421 TNKYQLSVHE LDESEENHYL LVMKGAPERI LDRCSTILQQ GKEQPMDEEL KEAFQNAYLE 480
  481 LGGLGERVLG FCHLVMPGDK YPKGFAFDTD DINSQTDNLC FVGLMSMIDP PRAAVPDAVG 540
  541 KCRSAGIKVI MVTGDHPITA KAIAKGVGII SEGNETVEDI AARLNIPVSQ VNPRDAKACV 600
  601 IHGTDLKDLS QDQMDEVLKN HTEIVFARTS PQQKLIIVEG CQRQGAIVAV TGDGVNDSPA 660
  661 LKKADIGVAM GISGSDVSKQ AADMILLDDN FASIVTGVEE GRLIFDNLKK SIRYTLTTTS 720
  721 LRSLHSCSSS WSTFLFLWAP SPSSALTWAL TWSLRSHWLM KQQRVTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle