YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68389578
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIAFLLLVV AFFCTSDAIV RIPLKKFRTL RRTLSDSGRS LEELVSSSNS LKYNLGFPAS  60
   61 NDPTPETLKN YLDAQYYGEI GLGTPVQTFT VVFDTGSSNL WVPSVHCSLT DIACLLHHKY 120
  121 NGGKSSTYVK NGTQFAIQYG SGSLSGYLSQ DTCTIGDIAV EKQIFGEAIK QPGVAFIAAK 180
  181 FDGILGMAYP RIAVDGVPPV FDMMMSQKKV EKNVFSFYLN RNPDTQPGGE LLLGGTDPKY 240
  241 YTGDFNYVDI SRQAYWQIHM DGMSIGSGLS LCKGGCEAIV DTGTSLITGP AAEVKALQKA 300
  301 IGAIPLMQGE YMVDCKKVPT LPTISFSLGG KVYSLTGEQY ILKVSLICLS GFMGLDIPPP 360
  361 AGPLWILGDV FIGQYYTVFD RENNRVGFAK AKSV

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	394	0.99