YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68387606
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPNGGEDF ESSLISLENL DRASPDLWPE QLPGVSEFAA SFKNPITNSP PKWMAELESE  60
   61 DIEMLKELGS LTTANLMEKV KGLQNLAYQL GLEESPLNEL TRDRVSRRRK IYCTFDMPAI 120
  121 KVLIWLMGIM QSGSENSPQS SRNDEREIPQ HLGEAQKVKR QMVIVDLWGQ LLADCETKLD 180
  181 IIYNLPETPH TWHKVWDKVH PGSYHKP

Type	Start	End	Confidence
Cytoplasmic	1	110	0.67
Transmembrane Helix	111	130	0.63
Non-Cytoplasmic	131	207	0.99