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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68381224
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FIKKIIKGLH LAQKSSQIIK ELPNIPFDER EIPAELHSSG AAIGGAVGGV ALLVAAIALL  60
   61 VFFLRRRQRT FKGDYSTKKH VFGNGYSKAG GMPAHPPMPK NLQYPDDSDD EKKPAQIRDY 120
  121 GTGVNHHLEV EAVFPRAEIA RQVAQMKLMR KLEKQALARA AKEARRQQAI MAAEERRKHK 180
  181 EQMKILKQQV RNQPRLLRLW QRETRINSIS GHLRGEVAYF APCEKPMAQG PPGGIFGILG 240
  241 VVVVAGLIVG VVATICMVYR RGQKPRTETD NDLIAVADSC VTKPEAPGTE APEKPESPTR 300
  301 KMAASSIPDG VESSGLHWCY DPDGSALATD ARGHGHGILV KTTDSHANSR QFDASSEQTK 360
  361 EKASVVKVAR HPRQNLYFSV PVNSGYIIIH IGSSLCFVNG ITVQKIGGFM TQQMSFFTFL 420
  421 AKLSEVILNI GCLDELSRSP SELIEENKWS KEEQHHVKIE EKNNLQTDSI LKRKDKNCFI 480
  481 CTQCGKSLSC KNKLKIHMMI HTGEKPFTCT QCGKSFSQLS SLNLHMRIHT GEKPYTCTQC 540
  541 GKSYSQLSSL NLHMRIHTGE KPFTCTQCGK SFSLLSSLNL HMRIHTGEKP FTCTQCGKSF 600
  601 SLSSNLNKHM KIHTGEKPFT CPQCGKSFSQ SSHLNKHMRI HTGEKPFTCP QCGKSFSQSS 660
  661 HLNKHMRIHT GEKPYTCPQC GKSFSQSSYL NKHMRIHTGE KPFTSNQCGK NFYCSLHLSK 720
  721 LGTDLPPAHK PAPPPPKKKG SDMKGGLTSD EIQVVHLDKE DEIQKIPLQP PYYDMAQSES 780
  781 TAFTDKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle