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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|190337077, gi...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.29
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHIHLPFGG ALWQFSSYPC CPVLRSRRSL STLPFYSITL WIILGVLTFP RCVQCLVFKV  60
   61 GIIGPWNCDP NYAKSLPAIA SRLAVGRINN DFSLDLGCTM DFVILQEACE TSKALTSFVQ 120
  121 YENVADAFVG PTNPGYCNAA ALMSKNWDKS LFSWACVNHE LDRVQGYPTF ARTLPSPLRV 180
  181 LFNVLKFFRW ANIGIVSSNE DIWIDTAAKL ASALRNRGLP VGIVTSMGNN DTMLENTLMS 240
  241 IKNAGDIKVI IMCMHSVLIG GEQQATFLTK AYDMGLASGR YVFIPYDTLL YSLPYINITY 300
  301 YPLQNNSKLS KAYDAVLTIT LDSDIMTFNE AFNAAKQLGE LMVTQEPEQV SPLFGTIYNS 360
  361 LYLLAKSMHN ARRAGRWLSG TNLAYFTRNI TFTGFNQDIQ TDEQGNGQTN YVILDTEAWG 420
  421 TQLYRCFLVD MTSDLVLFAG RFIHFPGESP PPSDSRCWFE DNAICTGGVD IIYVIIAFVI 480
  481 VLIIVLGSIG LSLFIRRRIQ QIQLIKGPNR ILLTLEDLTF INPQLSKRKI TLEDLSDSKS 540
  541 YIEEKSTGDR SRSVNSMATA THETSNVAVY EGDWVWLKKF TEGHFKEVKQ STTKIFTKMK 600
  601 DLRNENVNPF LGFFTDCEMF AIVTEHCSRG SLHDLLRNDD VKLDWMFKSS LVLDLIKGMK 660
  661 YLHHREFPHG RLKSRNCVVD GRFVLKITDY GYNEILETQK APKETLPPED LFWTAPEHLR 720
  721 DPESPRKGTY KGDVYSFAII LQEVVVRGAP YCMLGLSPEE IIRKVKKPPP MCRPTVAPDQ 780
  781 APLECIQLMK QCWSEQPDRR PPFDQIFDQF KLINKGKKTN IIDSMLRMLE QYSSNLEDLI 840
  841 RERTEELEVE KQRTEKLLSE MLPPSVAEAL KTGASVEPEY FDQVTIYFSD IVGFTTISSL 900
  901 SDPIEVVDLL NDLYSLFDAV LGSHDVYKVE TIGDAYMVAS GLPKKNGNKH AAEIANMSLN 960
  961 ILSSVGSFKM RHMPEVPVRI RIGIHSGPCV AGVVGLTMPR YCLFGDTVNT ASRMESTGLP1020
 1021 YRIHVNISTV QILRSLNDGY KIDVRGKTEL KGKGIEETYW LVGKANFTKP LPNPPEIKPG1080
 1081 DNWQDMMTEE IKSLFRKANR PVDKHKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle