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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68373903
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRELAAPSL AAAASAQNKT KNSVRDSVRM SKTKLIYDRQ NLLLLESASK LCWFDPKIIE  60
   61 TLKDYGLLSC REEARRVKET SNDTTRTRWR RRRCMRKQKR GVRGGAAARL RAFPCRTPLP 120
  121 SLMVANVRSL ENKLDNLRLE LTSTREDCFD CTDWTVFREA STNGQGTDIN EYADAVSSYI 180
  181 FKCMEDVCVT KNIKVRANEK PWMTAEVRAL LKTRNSAFKC GDAAVLRSAR ANLNRAIRVA 240
  241 KRAHGNKIKE YFQDHKDTRS LWQGIQSVTD YKSISLSCEN NIDFLNDLNN YFGRFDAVNN 300
  301 TPAVKATLQH DEQVLSFDIT DVRKTLKKVN AGKAAGPDKI PGRVLKGCAE QLAPVLTDIF 360
  361 NISMHQAVVP SCYKTSAIIP VPKKPSVTSL NDYRPIALTS LIMKCFEKLV KSHITSILPT 420
  421 SLDPLQFAYR PNRSTDDAIS TALHLSLEHL ESRNTSVRML FVDFSSAFNT IIPQHLVNKL 480
  481 ASLGLNTPLR NWILDFLTNR PQFVRVEGIS SSTTLLNTGS PQGCVLSPLL YTLMTHDCCA 540
  541 KLSTNHIIKY ADDTTIVGLI QDNDERNYRE KGVLWNQRSP PESACTSGRA CRARPPPQRW 600
  601 ISEAPGQGEG PGSLPKKGAC ASGRARKAQA PPTAGSHRPQ ARERGRARSP RRVRVPRAER 660
  661 ARHRPPPPLD LIGPRPGRGA GLAPQEGCVY PGQSARGTGL PNAGSHRPQA RERGRARSPR 720
  721 RVRVPRAERA GHRPPQRWIS EAPGQGEGPG SLPKKGACAS GRARKAQAPP TAGSQRPQAR 780
  781 ERGRARSPRR ARERGRARSP RRVRVPRAER ARHRPPPPLD LIGPRPGRGA GLAPQEGCVY 840
  841 PGQSARGTGL PNAGSHRPQA RERGRARSPR RVRVPRAERA GHRPPQRWIS EAPGQGEGPG 900
  901 SLPKKGACAS GRARKAQAPP TAGSHRPQAR ERGRARSPRR APGQGEGPGS LPKKGACTPG 960
  961 RARGAQASPT LDLRGPRPGR GAGLAPQEGC VCLGQSAQGT GPPHRWISEA PGQGEGPGSL1020
 1021 PKKGACASGR ARKAQAPPTA GSHRPQARER GRARSPRRVR VPRAERARHR PPPPLDLIGP1080
 1081 RPGRGAGLAP QEGCVYPGQS ARGTGLPNAG SHRPQARERG RARSPRRVRV PRAERAGHRP1140
 1141 PQRWISEAPG QGEGPGSLPK KGACTSGRAR KAQAPPTAGS HRPQARERGR ARSPRRVSKI1200
 1201 KPILLSPLQP ITSASLPPRL VEDLIKDYEK IKEEEHHLKI EDRNHLETDG ILKVRDKSCF1260
 1261 TCTQCGKSLA SKSKLKIHMR IHTGEKPFTC TQCGKSFSYS SHLNEHMMIH TGKKPFTCTQ1320
 1321 CGKSLTTKRK LKIHTMNHTG EKPFTCTQCG KSFSRSSSLN NHMKIHTGEK PFACTQCGKS1380
 1381 FSHSSHLNKH MRIHTGEKPF TCTLCGKSFS QSSHLNEHMR IHTGVRPFTC TQCGKSFSQS1440
 1441 SYITKHMRIH TGVRPFTCTL CGKSFSQSST LNLHMKIHTG EKPFTCTQCG KSFSQLSHLN1500
 1501 QHMMIHTGER PYTCTQCGTS FSTSSNLNKH MKIHTDTFIT AAELKRHQRI HTRAKPYQNQ1560
 1561 CSHCSKRFAH SRTLKTHERI HTGEKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle