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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68370412
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYGRPPPDV EGMTSLKVDN LTYRTSPETL RRVFEKYGRV GDVYIPRDRY TKESRGFAFV  60
   61 RFHDKRDAED AMDAMDGALL DGRELRVQMA RYGRPPDAHY SRRGAPPRRY GGYGRRSRSR 120
  121 FLFVPQTSYA SSNIRNSRSY FASHFIMGGE KFDSTHPEGY LFGENTDLNF LGNRPVVFPY 180
  181 NAPPPHEPVK TLRSLINIRK DTLRLVRCSE DMKLPGQEVG KSHSCYNIEF TFDADTQVAI 240
  241 TIYYQAIEEF HNGVPIYLPQ DSSLQSETVH FKRGVCQQFC LPSHYVNLSE WAEDELLFDM 300
  301 DKDIYPMVVQ AVVDEGDEHL GHSHVLLATF EKHMDGSYCV KPLKQKQVVD GVSYLLQEIY 360
  361 GIENKYNSQE SKVAEDEISD NSAECVVCLS DVRDTLILPC RHLCLCNACA DTLRYQANCC 420
  421 PICRLPFRAL LQIRAMRKKL SPLTPTGFNP VITSQTSDSE EHSASEHIPP GYEAVSLLEA 480
  481 LNGPLNPSPS APPLQGLTRG HVSGSVPTFG SESHHTPVRS LSPLDHSVNP NQTVKHKKSG 540
  541 SKSLSQNSSV LPEEEDEKSC SESEAQTCRR KLHVEQQEVQ SGVTPESDNL TLSSSGAIDQ 600
  601 SCNGTPLSST ITSPEDPVSS SLAQSVMSMA SSHSQHSQIS TDTLSSMSGS YMAGAEGEEA 660
  661 AETPAESRAP SQHEGEDIPN DGKAHNFVAA ILEEQDSEGN DVTEEDCASP TKEHGLLYLD 720
  721 VYRHGRDPLT HHASTSNINL EEQGVTNEAA NPKNKSNRGP LMFYWKEENL PEEQPSLLHS 780
  781 TNQANGVLSK QVCSKQDVLD YLNLTRGNEK FTTCRPPLDW TKPTIVYFDI HLFCILSVIS 840
  841 IRRMPLMHFI NFQLPVLIFL ILDLASFFIP DRPEKLSFKV TVLLAMSVLL LVLNDILPSK 900
  901 SHKCPLIAAY VISIFCFMLL SLLETILEVY LLHLISEQDT KAVQSPEDHN SETAICKGDI 960
  961 NDGIFCSKVE SQEMLNKEKV NELHLLQRIL EELQTIKHSL VPHSLEGKTE QNHWLRLVTW1020
 1021 FNRGFFVVYL ISVSVFLYII IQEWEFE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle