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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68370064
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSGYESQE HKSVCHFSVT ELCTGPSCHN NQMEIRIMVV CLIWLVRGGA ADMADAEDES  60
   61 RNDSLQRKKP PWLRLDIPTV EEHNHFLQPV MRNSLYLRSA SVPTENIQLR CPPVDINGCR 120
  121 RPSVLRKPSI SQTIKSPTGK RVRFEQMSTV LVKGHCVSRL EADRRQSLPQ IVLRLCPKVV 180
  181 GRQGPVITLV TEPYLQTKVF KVARGTADWF GVSNDLDATQ KWQRKSLRHC TQRYGKLKPQ 240
  241 VIREMDLPSQ DNLSMTSTET PPPLYVPPPH HGMQRIVDPL ARGRAFRNVD EVDGVNVPQT 300
  301 PITPCAASLC SFTSSRSGFN RPPRRRKRES VAKMGFRAAA ALVKGRSLRD GAVRRLPRRS 360
  361 FAAASFLDED TVDFPDELDT SFFAKDGVTH EELSTYTDEV FESPSEAAIK ETDASRAGDE 420
  421 RDLTGSALEK TELERSHLML PLERGWRKAK DGALVQPKVR LRQEVVSVTG QRRGQRITVP 480
  481 VKKLFAKEKR PYGLGMVGKL TNRTYRKRID SYVKKQIEDM NDHRPFFTYW ITFVHLLITV 540
  541 LAVSIYGIAP VGFSQHETVD SVLRNKGVYE NVRFMQQENF WVGPSSEALI HLGAKFSPCM 600
  601 RQDEEVHQLI QQKKASEKHS ACCVRNDQSG CVQTSQEECS STLALWVKWP QHPSAPVLGD 660
  661 KVRQYGSVCH QDPRICLEPA SVSPHVWPDD ISKWPICTRY STGNHTNLPH IDCVITGRPC 720
  721 CIGTKGRCEI TSREYCDFMK GYFHEEATLC SQVHCMDDVC GLLPFLNPEI PDQFYRLWLS 780
  781 LFLHAGILHC LVSVCFQMTI LRDLEKLAGW LRISIIYILS GITGNLASAI FLPYRAEVGP 840
  841 AGSQFGILAC LFVELFQSWQ ILARPWRAFT KLSCVVLFLF AFGLLPWIDN FAHICGFVSG 900
  901 FFLSFAFLPY ISFGRMDMYR KRLQILVALT LFVGIFSSFV VLFYVYPVKC EWCEFLTCIP 960
  961 LTDKFCEKYD LNAHLH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle